ymcA [2017-02-27 15:02:04]

antagonist of biofilm repression by SinR, control of the phosphorelay

locus: BSU17020

pI: 5.00

mw: 16.00 kDa

protein length: 143 aa

gene length: 429 bp

function: control of biofilm formation and the phosphorelay

product: antagonist of biofilm repression by SinR

essential: no

synonyms

Genomic Context

categories

• [category|SW 3|Information processing] → [category|SW 3.2|RNA synthesis and degradation] → [category|SW 3.2.4|RNases] → [category|SW 3.2.4.5|Effectors of RNA degradation]
• [category|SW 3|Information processing] → [category|SW 3.4|Regulation of gene expression] → [category|SW 3.4.2|Transcription factors and their control] → [category|SW 3.4.2.7|Control of transcription factor (other than two-component system)]
• [category|SW 3|Information processing] → [category|SW 3.4|Regulation of gene expression] → [category|SW 3.4.7|phosphorelay] → [category|SW 3.4.7.6|Other protein controlling the activity of the phosphorelay]
• [category|SW 4|Lifestyles] → [category|SW 4.1|Exponential and early post-exponential lifestyles] → [category|SW 4.1.2|Biofilm formation]
• [category|SW 4|Lifestyles] → [category|SW 4.1|Exponential and early post-exponential lifestyles] → [category|SW 4.1.2|Biofilm formation] → [category|SW 4.1.2.5|Other proteins required for biofilm formation]
• [category|SW 4|Lifestyles] → [category|SW 4.2|Sporulation] → [category|SW 4.2.2|phosphorelay] → [category|SW 4.2.2.6|Other protein controlling the activity of the phosphorelay]

Gene

Coordinates on the chromosome (coding sequence): 1,774,374 -> 1,774,805

Phenotypes of a mutant

• strongly reduced [SW|genetic competence], strongly reduced [SW|sporulation] [Pubmed|23490197]

The protein

Structure

• [PDB|2PIH]

Expression and Regulation: [[this]]

References

• 15661000,23490197,15175311,26434553