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ymcA [Mon Aug 31 2015 13:54:26 GMT+0200 (CEST)]
antagonist of biofilm repression by SinR, control of the phosphorelay
function
control of biofilm formation and the phosphorelay
product
antagonist of biofilm repression by SinR
Genomic Context
categories
[category|SW 3|Information processing] → [category|SW 3.2|RNA synthesis and degradation] → [category|SW 3.2.4|RNases] → [category|SW 3.2.4.5|Effectors of RNA degradation][category|SW 3|Information processing] → [category|SW 3.4|Regulation of gene expression] → [category|SW 3.4.2|Transcription factors and their control] → [category|SW 3.4.2.7|Control of transcription factor (other than two-component system)][category|SW 3|Information processing] → [category|SW 3.4|Regulation of gene expression] → [category|SW 3.4.7|phosphorelay] → [category|SW 3.4.7.6|Other protein controlling the activity of the phosphorelay][category|SW 4|Lifestyles] → [category|SW 4.1|Exponential and early post-exponential lifestyles] → [category|SW 4.1.2|Biofilm formation][category|SW 4|Lifestyles] → [category|SW 4.1|Exponential and early post-exponential lifestyles] → [category|SW 4.1.2|Biofilm formation] → [category|SW 4.1.2.5|Other proteins required for biofilm formation][category|SW 4|Lifestyles] → [category|SW 4.2|Sporulation] → [category|SW 4.2.2|phosphorelay] → [category|SW 4.2.2.6|Other protein controlling the activity of the phosphorelay][SW|Categories] containing this gene/protein
[SW|transcription factors and their control], [SW|phosphorelay], [SW|biofilm formation]Gene
Coordinates on the chromosome (coding sequence)
1,774,374 -> 1,774,805
Phenotypes of a mutant
strongly reduced [SW|genetic competence], strongly reduced [SW|sporulation] [Pubmed|23490197]The protein
Structure
[PDB|2PIH][SW|Interactions]
[protein|search|YmcA]-[protein|search|YlbF]-[protein|search|YaaT], this complex stimulates [SW|Spo0A] phosphorylation in the [SW|phosphorelay] [Pubmed|23490197][protein|search|YmcA]-[SW|Spo0B] [Pubmed|23490197][protein|search|YmcA]-[SW|Spo0F] [Pubmed|23490197]Expression and Regulation
Regulation
expressed during growth and the transition phase, expression is erduced in stationary phase ([SW|Spo0A]-P) [Pubmed|23490197]References
15661000,23490197,15175311 
