SubtiBank SubtiBank
xkdP
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xkdP

PBSX prophage
Locus
BSU_12690
Isoelectric point
10.52
Molecular weight
27.02 kDa
Protein length
219 aa Sequence Blast
Gene length
660 bp Sequence Blast
Function
unknown
Product
unknown
Essential
no
Synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      
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Categories containing this gene/protein

  • Prophages and mobile genetic elements → Prophages → PBSX prophage

    • Gene

    Coordinates
    1,338,957 → 1,339,616

    The protein

    Domains

  • contains a N-acetylglucosamine-polymer-binding LysM domain at the C-terminus PubMed
  • LysM domain (aa 159-217) (according to UniProt)

    • Expression and Regulation

    Operons

    Genes
    xtmA-xtmB-xkdE-xkdF-xkdG-xkdH-xkdI-xkdJ-xkdK-xkdM-xkdN-xkzB-xkdO-xkdP-xkdQ-xkdR-xkdS-xkdT-xkdU-xkzA-xkdV-xkdW-xkdX-xepA-xhlA-xhlB-xlyA
    Description
    PubMed

    Sigma factors

  • Xpf: sigma factor, PubMed, in Xpf regulon

    • Regulation

  • expression during spore germination is strongly reduced under conditions of osmotic stress PubMed
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    Biological materials

    Mutant

  • BKE12690 (ΔxkdP::erm trpC2) available at BGSC, PubMed, upstream reverse: _UP1_ATTTAGTCAAATGCAACGAC, downstream forward: _UP4_CCGCAATGAAACAGGTGATG
  • BKK12690 (ΔxkdP::kan trpC2) available at BGSC, PubMed, upstream reverse: _UP1_ATTTAGTCAAATGCAACGAC, downstream forward: _UP4_CCGCAATGAAACAGGTGATG

    • References

    Reviews

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