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ykzQ
similar to potassium binding protein
Genomic Context
categories
[category|SW 6|Groups of genes] → [category|SW 6.7|Proteins of unknown function]Gene
Coordinates
1,445,314 → 1,445,541
The protein
[SW|Domains]
contains a N-acetylglucosamine-polymer-binding [SW|LysM domain] [Pubmed|18430080][SW|LysM domain] (aa 29-72) (according to UniProt)Structure
[PDB|5FIM] (from E. coli, 36% identity) [pubmed|27112601][SW|Localization]
outer spore coatExpression and Regulation
Operons
genes
[gene|FC4C5377EF1D794DCB19D0A8AFE958B84BD9C8BE|ykvP]-[gene|E8311435A86835799E9093DD9CF3733CFFF18DCC|ykzQ]-[gene|BC8CBFF0C2F3C2BEE3275E2CB65D41F2AFC0A1CD|ykvQ]-[gene|4FDAD5E5660EDB346A37C1F41BD8B7B66561E529|ykzR]
description
[Pubmed|11011148,22383849]
sigma factors
[protein|24F7FD5C7C3A68BB2760ABB8CBD8FBD65E5FF7D4|SigK]: sigma factor, [Pubmed|11011148,15699190], in [regulon|24F7FD5C7C3A68BB2760ABB8CBD8FBD65E5FF7D4|SigK regulon]regulation
expressed late during sporulation in the mother cell ([protein|24F7FD5C7C3A68BB2760ABB8CBD8FBD65E5FF7D4|SigK]) [Pubmed|11011148,15699190]view in new tabgenes
[gene|E8311435A86835799E9093DD9CF3733CFFF18DCC|ykzQ]
description
[pubmed|22383849]
sigma factors
[protein|24F7FD5C7C3A68BB2760ABB8CBD8FBD65E5FF7D4|SigK]: sigma factor, [Pubmed|26577401], in [regulon|24F7FD5C7C3A68BB2760ABB8CBD8FBD65E5FF7D4|SigK regulon]regulatory mechanism
[protein|19228BAD44E6DA3DE908DC390FDF628C18D94E65|GerE]: activation, [Pubmed|26577401], in [regulon|19228BAD44E6DA3DE908DC390FDF628C18D94E65|GerE regulon]view in new tabBiological materials
Mutant
BKE13789 (Δ[gene|E8311435A86835799E9093DD9CF3733CFFF18DCC|ykzQ]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE13789 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CCCCTTCATTCATATTACTC, downstream forward: _UP4_TAATCTTTGAGGTTTCGGAABKK13789 (Δ[gene|E8311435A86835799E9093DD9CF3733CFFF18DCC|ykzQ]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK13789 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CCCCTTCATTCATATTACTC, downstream forward: _UP4_TAATCTTTGAGGTTTCGGAAReferences
18430080,26577401,27766092,27112601