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ywrB [2019-07-12 10:47:30]
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ywrB [2019-07-12 10:47:30]

subunit of chromate exporter (with [protein|70CC5C9BCC676AB89C0BF80686BD98BA08FAE648|YwrA])
locus
BSU36120
pI
9.94
mw
20.87 kDa
protein length
197 aa Sequence Blast
gene length
594 bp Sequence Blast
function
chromate detoxification
product
chromate exporter
essential
no
synonyms
chr3N
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 1|Cellular processes] → [category|SW 1.2|Transporters] → [category|SW 1.2.4|Transporters/ other] → [category|SW 1.2.4.11|Other exporters]
  • [category|SW 4|Lifestyles] → [category|SW 4.3|Coping with stress] → [category|SW 4.3.11|Resistance against toxic metals]
  • [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]

    • Gene

    Coordinates
    3,721,415 → 3,722,008

    The protein

    [SW|Localization]

  • cell membrane [Pubmed|22900751]

    • Expression and Regulation

    Operons

    genes
    [gene|C0BEEAD315077FE3D0D061D1D447D03E6CB48D6A|chrS]-[gene|E63704C51B53F05BAD9B35D3B6874DB9231B6D24|ywrB]-[gene|70CC5C9BCC676AB89C0BF80686BD98BA08FAE648|ywrA]
    description
    [Pubmed|22383849]

    sigma factors

  • [protein|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|SigA]: sigma factor, [Pubmed|23989926], in [regulon|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|SigA regulon]

    • regulatory mechanism

  • [protein|C0BEEAD315077FE3D0D061D1D447D03E6CB48D6A|ChrS]: repression, [Pubmed|23989926], in [regulon|C0BEEAD315077FE3D0D061D1D447D03E6CB48D6A|ChrS regulon]
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    Biological materials

    Mutant

  • MGNA-A570 (ywrB::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/570 NBRP B. subtilis, Japan]
  • BKE36120 (Δ[gene|E63704C51B53F05BAD9B35D3B6874DB9231B6D24|ywrB]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE36120 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTGTTTCTCTCCTTTAC, downstream forward: _UP4_TCATGATATCGATCTATTTA
  • BKK36120 (Δ[gene|E63704C51B53F05BAD9B35D3B6874DB9231B6D24|ywrB]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK36120 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTGTTTCTCTCCTTTAC, downstream forward: _UP4_TCATGATATCGATCTATTTA

    • References

  • 19581367,22383849,22900751,23989926