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lutP [2019-06-18 11:20:27]
Genomic Context
categories
[category|SW 1|Cellular processes] → [category|SW 1.2|Transporters] → [category|SW 1.2.4|Transporters/ other] → [category|SW 1.2.4.4|Transporter for organic acids][category|SW 2|Metabolism] → [category|SW 2.2|Carbon metabolism] → [category|SW 2.2.2|Utilization of specific carbon sources] → [category|SW 2.2.2.1|Utilization of organic acids][category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]Gene
Coordinates
3,510,780 → 3,512,471
Phenotypes of a mutant
poor growth with lactate as single carbon source [Pubmed|19201793]The protein
Catalyzed reaction/ biological activity
lactate uptake [Pubmed|19201793]Protein family
lactate permease family (according to Swiss-Prot)Paralogous protein(s)
[protein|84D391ED4E81BC17FC2A115985962445D7996DFA|LctP] [SW|Localization]
membrane [Pubmed|18763711]Expression and Regulation
Operons
genes
[gene|E607B0D57398BCCF64CF3CE2110E632B0C3A109E|lutP]
description
[Pubmed|22383849]
sigma factors
[protein|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|SigA]: sigma factor, [Pubmed|25031425], in [regulon|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|SigA regulon]regulatory mechanism
[protein|7832489F11F606BCF637EC23BAAB41AD10237EBB|ComA]: activation, ([protein|7832489F11F606BCF637EC23BAAB41AD10237EBB|ComA]) [Pubmed|16091051], in [regulon|7832489F11F606BCF637EC23BAAB41AD10237EBB|ComA regulon][protein|E6F3BAC5875A16D8D75B2AD21447C14DD17B3DA6|LutR]: repression, in [regulon|E6F3BAC5875A16D8D75B2AD21447C14DD17B3DA6|LutR regulon]regulation
expressed at high cell density ([protein|search|ComA]) [Pubmed|16091051]view in new tabBiological materials
Mutant
MGNA-A489 (yvfH::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/489 NBRP B. subtilis, Japan]BKE34190 (Δ[gene|E607B0D57398BCCF64CF3CE2110E632B0C3A109E|lutP]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE34190 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCCCAAACCCCTCCTTGA, downstream forward: _UP4_TAAAAAAATCCTCCCGTCTABKK34190 (Δ[gene|E607B0D57398BCCF64CF3CE2110E632B0C3A109E|lutP]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK34190 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCCCAAACCCCTCCTTGA, downstream forward: _UP4_TAAAAAAATCCTCCCGTCTAlabs
[SW|Richard Losick], Harvard Univ., Cambridge, USA [http://www.mcb.harvard.edu/Losick/ homepage]References
19201793,18763711,16091051,25031425,26582911