SubtiBank SubtiBank
yhxA [2017-8-11 16:0:3]
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yhxA [2017-8-11 16:0:3]

similar to adenosylmethionine-8-amino-7-oxononanoate aminotransferase
locus
BSU09260
pI
5.64
mw
49.71 kDa
protein length
450 aa Sequence Blast
gene length
1350 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 6|Groups of genes] → [category|SW 6.6|Poorly characterized/ putative enzymes]

    • Gene

    Coordinates
    1,000,364 → 1,001,716

    The protein

    Protein family

  • class-III pyridoxal-phosphate-dependent aminotransferase family (according to Swiss-Prot)

    • Paralogous protein(s)

  • [protein|13DC4296015A28975BC7697F134FB6ECD6B11489|YodT] (34%), [protein|68C86FED3575B864C576DFB73FE7B5BF83994D1F|BioA] (33,6%), [protein|4E1FD02C6FE4103E3B4942BF5221C062CB8D0B9B|GabT] (32.8%)

    • Structure

  • [PDB|3N5M] (from ''Bacillus Anthracis'', 64% identity)

    • Additional information

  • subject to Clp-dependent proteolysis upon glucose starvation [Pubmed|17981983]

    • Expression and Regulation

    Operons

    genes
    [gene|E5F6DF14A4C01B2C90F70E37908D3697BC1B5FEF|yhxA]-[gene|38767691AE7E09F46B9E97A60BF5358C1876EDF8|glpP]
    description
    [Pubmed|2127799]

    sigma factors

  • [protein|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|SigA]: sigma factor, [Pubmed|21925382], in [regulon|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|SigA regulon]

    • additional information

  • half-life of the mRNA: 3.7 min [PubMed|21925382]
  • half-life of the mRNA: 3.7 min [PubMed|21925382]
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    Biological materials

    Mutant

  • MGNA-B475 (yhxA::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1474 NBRP B. subtilis, Japan]

    • References

  • 17981983,2127799,21925382