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yjgC [2019-06-27 15:25:08]
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yjgC [2019-06-27 15:25:08]

general stress protein, formate dehydrogenase, important for survival of salt and ethanol stress
Locus
BSU12160
Isoelectric point
5.18
Molecular weight
109.58 kDa
Protein length
985 aa Sequence Blast
Gene length
2958 bp Sequence Blast
Function
unknown
Product
formate dehydrogenase
Essential
no
Synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      
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Categories containing this gene/protein

  • Metabolism → Electron transport and ATP synthesis → Electron transport/ other/ based on similarity
  • Lifestyles → Coping with stress → General stress proteins (controlled by SigB)

    • Gene

    Coordinates
    1,285,591 → 1,288,548

    The protein

    Protein family

  • prokaryotic molybdopterin-containing oxidoreductase family (according to UniProt)

    • Paralogous protein(s)

  • YrhE

    • Cofactors

  • Fe-S cluster PubMed

    • Structure

  • 2FUG (from Thermus thermophilus, 23% identity) PubMed

    • Expression and Regulation

    Operons

    Genes
    yjgC-yjgD
    Description
    PubMed

    Sigma factors

  • SigB: sigma factor, PubMed, in SigB regulon

    • Regulation

  • induced by stress (SigB) PubMed
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    Biological materials

    Mutant

  • MGNA-A354 (yjgC::erm), available at the NBRP B. subtilis, Japan
  • BKE12160 (ΔyjgC::erm trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CATCTCCATTCCCCTTTCTT, downstream forward: _UP4_GCTGTGAAAAGGGGGATGGG
  • BKK12160 (ΔyjgC::kan trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CATCTCCATTCCCCTTTCTT, downstream forward: _UP4_GCTGTGAAAAGGGGGATGGG

    • References

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