yopO

similar to transcription regulator (Xre family)

locus: BSU_20820

pI: 4.29

mw: 7.81 kDa

protein length: 70 aa

gene length: 213 bp

function: unknown

product: unknown

essential: no

synonyms

Genomic Context

categories

• [category|SW 3|Information processing] → [category|SW 3.4|Regulation of gene expression] → [category|SW 3.4.2|Transcription factors and their control] → [category|SW 3.4.2.6|Transcription factor/ other/ based on similarity]
• [category|SW 5|Prophages and mobile genetic elements] → [category|SW 5.1|Prophages] → [category|SW 5.1.2|SP-beta prophage]

Gene

Coordinates: 2,207,748 → 2,207,960

The protein

Protein family

• [SW|Xre family]

[SW|Domains]

• [SW|HTH cro/C1-type domain] (aa 5-59) (according to UniProt)

Expression and Regulation

Operons

• genes: [gene|8B15C7311E9791DC1FF29FF1A46ECC70E93FE2F4|yopM]-[gene|01BE35FB190DDC77BE19C013A8E0D980B132CBE1|yopN]-[gene|E1B90896149DBA399174478D412DCDC242AB1834|yopO]-[gene|30D16B0061BBE33B6B53F219A6654A40F2185C53|yopP]-[gene|25F9A95D40FD5FA1114A1938D6B0DE2368B8689E|yopQ]-[gene|7F82DED7C941BC501B6F810BF6541780AB87EDDD|yopR]
  description: [Pubmed|22383849]

Biological materials

Mutant

• BKE20820 (Δ[gene|E1B90896149DBA399174478D412DCDC242AB1834|yopO]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE20820 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGTCAACCTCCTATTTTT, downstream forward: _UP4_TTAGATGAGAAAGGAGGAGA
• BKK20820 (Δ[gene|E1B90896149DBA399174478D412DCDC242AB1834|yopO]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK20820 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGTCAACCTCCTATTTTT, downstream forward: _UP4_TTAGATGAGAAAGGAGGAGA

References

• 23504016