ydhD [Tue Dec 13 2016 11:16:31 GMT+0100 (CET)]

spore coat peptidoglycan hydrolase

locus: BSU05710

pI: 9.00

mw: 48.00 kDa

function: unknown

product: spore coat glycosylase

essential: no

synonyms

Genomic Context

categories

• [category|SW 1|Cellular processes] → [category|SW 1.1|Cell envelope and cell division] → [category|SW 1.1.6|Cell wall/ other/ based on similarity]
• [category|SW 4|Lifestyles] → [category|SW 4.2|Sporulation] → [category|SW 4.2.1|Sporulation proteins] → [category|SW 4.2.1.1|Spore coat proteins] → [category|SW 4.2.1.1.8|Not yet assigned]

[SW|Categories] containing this gene/protein

• [SW|cell wall/ other], [SW|sporulation proteins]

This gene is a member of the following [SW|regulons]

• [SW|SigE regulon]

Gene

Coordinates on the chromosome (coding sequence): 616,672 -> 617,934

The protein

Protein family

• Chitinase class II subfamily (according to Swiss-Prot)

Paralogous protein(s)

• [SW|YaaH]

[SW|Domains]

• contains two N-acetylglucosamine-polymer-binding [SW|LysM domain]s at the N-terminus [Pubmed|18430080]
• [SW|glycoside hydrolase family 18 domain ] (aa 120 to 400)

Structure

• [PDB|3CZ8]

[SW|Localization]

• spore wall (according to Swiss-Prot)

Expression and Regulation

Operon

• ''ydhD'' [Pubmed|11011148]

[SW|Sigma factor]

• [protein|search|SigE] [Pubmed|11011148,15699190]

Regulation

• expressed during sporulation ([protein|search|SigE])

References

Reviews

• 18430080

Original publications

• 11011148,15699190