SubtiBank SubtiBank
ylbK [2019-07-01 09:40:23]
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ylbK [2019-07-01 09:40:23]

similar to patatin-like phospholipase
locus
BSU15040
pI
9.16
mw
28.11 kDa
protein length
260 aa Sequence Blast
gene length
783 bp Sequence Blast
function
unknown
product
putative phospholipase
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 6|Groups of genes] → [category|SW 6.6|Poorly characterized/ putative enzymes]

    • Gene

    Coordinates
    1,571,981 → 1,572,763

    The protein

    Protein family

  • patatin domain (according to Swiss-Prot)

    • Structure

  • [PDB|5FYA] (from Pseudomonas aeruginosa, 35% identity) [pubmed|27012424]

    • Expression and Regulation

    Operons

    genes
    [gene|DE3BCF20DE5BB438ACBB36B412817F6124CFDFFC|ylbK]-[gene|1A5C1BDE844AA56B90C0E4A02D74978676487E99|ddcP]
    description
    [pubmed|22383849]
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    Biological materials

    Mutant

  • MGNA-B247 (ylbK::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1246 NBRP B. subtilis, Japan]
  • BKE15040 (Δ[gene|DE3BCF20DE5BB438ACBB36B412817F6124CFDFFC|ylbK]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE15040 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAAAGCGTTAACCTCCTGCC, downstream forward: _UP4_ATAGAGAATTGGGAGGGCTC
  • BKK15040 (Δ[gene|DE3BCF20DE5BB438ACBB36B412817F6124CFDFFC|ylbK]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK15040 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAAAGCGTTAACCTCCTGCC, downstream forward: _UP4_ATAGAGAATTGGGAGGGCTC

    • References

  • 20525796,27012424