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ydaE
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ydaE

lyxose isomerase, general stress protein, survival of ethanol stress and low temperatures
Locus
BSU_04200
Isoelectric point
4.88
Molecular weight
19.11 kDa
Protein length
167 aa Sequence Blast
Gene length
504 bp Sequence Blast
Function
survival of ethanol stress and low temperatures
Product
lyxose isomerase
Essential
no
Synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      
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Categories containing this gene/protein

  • Metabolism → Carbon metabolism → Utilization of specific carbon sources → Utilization of other pentoses and hexoses
  • Lifestyles → Coping with stress → General stress proteins (controlled by SigB)

    • Gene

    Coordinates
    472,585 → 473,088

    The protein

    Catalyzed reaction/ biological activity

  • D-lyxose --> D-xylulose (according to UniProt)

    • Protein family

  • D-lyxose ketol-isomerase family (single member, according to UniProt)

    • Structure

  • 2Y0O PubMed

    • Expression and Regulation

    Operons

    Genes
    ydaD-ydaE
    Description
    PubMed

    Sigma factors

  • SigB: sigma factor, PubMed, in SigB regulon

    • Regulation

  • induced by stress (SigB) PubMed
    • view in new tab

    Genes
    ydaD-ydaE-ydaF-ydaG
    Description
    PubMed

    Sigma factors

  • SigB: sigma factor, PubMed, in SigB regulon

    • Regulation

  • induced by stress (SigB) PubMed
    • view in new tab

    Biological materials

    Mutant

  • MGNA-C087 (ydaE::erm), available at the NBRP B. subtilis, Japan
  • BKE04200 (ΔydaE::erm trpC2) available at BGSC, PubMed, upstream reverse: _UP1_GATGCCCATATGTCTCACTC, downstream forward: _UP4_TAAGGATGGGCTTAACAGCC
  • BKK04200 (ΔydaE::kan trpC2) available at BGSC, PubMed, upstream reverse: _UP1_GATGCCCATATGTCTCACTC, downstream forward: _UP4_TAAGGATGGGCTTAACAGCC

    • References

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