SubtiBank SubtiBank
yvbX
You are currently viewing an outdated version of SubtiWiki. Please use the newest version!

yvbX

putative glycoside hydrolase
locus
BSU_34020
pI
9.93
mw
38.79 kDa
protein length
344 aa Sequence Blast
gene length
1035 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 6|Groups of genes] → [category|SW 6.7|Proteins of unknown function]

    • Gene

    Coordinates
    3,491,655 → 3,492,689

    The protein

    Protein family

  • [SW|Glycosyl hydrolase 18 family] (according to UniProt)

    • [SW|Domains]

  • [SW|glycoside hydrolase family 18 domain] (aa 25 to 344)

    • Structure

  • [PDB|5JH8] (from Chromobacterium violaceum, 34% identity)

    • Biological materials

    Mutant

  • MGNA-A469 (yvbX::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/469 NBRP B. subtilis, Japan]
  • BKE34020 (Δ[gene|DAB047D274936832345F3DCB675768E30B5077CF|yvbX]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE34020 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCGCATTTCCTCCTGTAT, downstream forward: _UP4_TAACAGTTTCTTTTTTCTCT
  • BKK34020 (Δ[gene|DAB047D274936832345F3DCB675768E30B5077CF|yvbX]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK34020 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCGCATTTCCTCCTGTAT, downstream forward: _UP4_TAACAGTTTCTTTTTTCTCT