SubtiBank SubtiBank
yjdA [2018-02-12T22:46:13.000Z]
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yjdA [2018-02-12T22:46:13.000Z]

similar to 3-oxoacyl-acyl-carrier protein reductase
locus
BSU11980
pI
5.70
mw
27.30 kDa
protein length
251 aa Sequence Blast
gene length
753 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
yidA
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 6|Groups of genes] → [category|SW 6.6|Poorly characterized/ putative enzymes]

    • Gene

    Coordinates
    1,268,829 → 1,269,584

    The protein

    Paralogous protein(s)

  • [protein|439B468A13137000FB42E9389391CB4986FFED84|FabG] (30%), [protein|EAEEA4DD9641919830A81185333A2610B964D37C|YhdF] (34%), [protein|3161519994609DA9360ED6E073E4A4C8C6210EFB|YdaD] (33,3%), [protein|248F0805272FED9B38ECBB31E2872BC9EC163CE0|YmfI] (30,8%), [protein|6047F2493FCE3D2A9BDB1AD88E5926ECEED81036|YhxC] (32.9%), [protein|CE990D33A12C50D22506A52E0099F7D97A762D4E|FadH] (31.9%)

    • Structure

  • [PDB|4JRO] (from ''Listeria Monocytogenes'', 33% identity)

    • Expression and Regulation

    Operons

    genes
    [gene|D9C06D872E2531B6A72C0AA18B42CEAE09698041|yjcS]-[gene|D9D1FCBFC62F93CAA34DF61A784406F4E9EE6768|yjdA]
    description
    [Pubmed|22383849]
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    Biological materials

    Mutant

  • MGNA-A272 (yjdA::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/272 NBRP B. subtilis, Japan]
  • BKE11980 (Δ[gene|D9D1FCBFC62F93CAA34DF61A784406F4E9EE6768|yjdA]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE11980 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTATTTTAACCTCCAATT, downstream forward: _UP4_TAAGCTAATGAAACACGGTA
  • BKK11980 (Δ[gene|D9D1FCBFC62F93CAA34DF61A784406F4E9EE6768|yjdA]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK11980 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTATTTTAACCTCCAATT, downstream forward: _UP4_TAAGCTAATGAAACACGGTA