yrkI

putative sulfur carrier protein

locus: BSU_26500

pI: 6.08

mw: 8.10 kDa

protein length: 75 aa

gene length: 228 bp

function: unknown

product: unknown

essential: no

synonyms

Genomic Context

categories

• [category|SW 6|Groups of genes] → [category|SW 6.7|Proteins of unknown function]

Gene

Coordinates: 2,710,848 → 2,711,075

The protein

Protein family

• sulfur carrier protein TusA family (with [protein|5FC3DF596816AA4E8541B324EC6DE6D89C90C8E2|YrkF], according to UniProt)

Structure

• [PDB|1PAV] (from Thermoplasma acidophilum, 32% identity) [pubmed|14739641]

Expression and Regulation

Operons

• genes: [gene|6AD1DD074B2F044C6A4E4B98FABC4E7FD67B3139|yrzM]-[gene|8A3F1BFDF85DD96B7FB4EBC807F71639AF69DE98|yrkD]-[gene|1F1FE531622CD218EE8990CDAC6D2D2F9E86FE3F|yrkE]-[gene|5FC3DF596816AA4E8541B324EC6DE6D89C90C8E2|yrkF]-[gene|06CC915A18E5ADD42B784B7BBBFD4C344559A34E|yrkH]-[gene|D996F581E21395C3F9CC064800C49A765EFC17A7|yrkI]-[gene|F3E842844B315FE438F66995CDFB8BA1C32BDF23|yrkJ]-[gene|1BEBD09273240B6B50DABCB160FCCBC205BB2AAE|yrkK]-[gene|search|yrkM]
  description: [Pubmed|22383849]

• genes: [gene|6AD1DD074B2F044C6A4E4B98FABC4E7FD67B3139|yrzM]-[gene|8A3F1BFDF85DD96B7FB4EBC807F71639AF69DE98|yrkD]-[gene|1F1FE531622CD218EE8990CDAC6D2D2F9E86FE3F|yrkE]-[gene|5FC3DF596816AA4E8541B324EC6DE6D89C90C8E2|yrkF]-[gene|06CC915A18E5ADD42B784B7BBBFD4C344559A34E|yrkH]-[gene|D996F581E21395C3F9CC064800C49A765EFC17A7|yrkI]
  description: [Pubmed|22383849]

Biological materials

Mutant

• MGNA-C508 (yrkI::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2506 NBRP B. subtilis, Japan]
• BKE26500 (Δ[gene|D996F581E21395C3F9CC064800C49A765EFC17A7|yrkI]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE26500 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGTTCTTCTCTCCTCTTT, downstream forward: _UP4_TAATGAATGTGAAAGGGTAT
• BKK26500 (Δ[gene|D996F581E21395C3F9CC064800C49A765EFC17A7|yrkI]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK26500 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGTTCTTCTCTCCTCTTT, downstream forward: _UP4_TAATGAATGTGAAAGGGTAT

References

Research papers

• 14739641