SubtiBank SubtiBank
yusZ [2018-02-10T02:38:40.000Z]
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yusZ [2018-02-10T02:38:40.000Z]

putative short-chain acyl dehydrogenase
locus
BSU32980
pI
9.17
mw
30.64 kDa
protein length
280 aa Sequence Blast
gene length
840 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
yvxA
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 6|Groups of genes] → [category|SW 6.6|Poorly characterized/ putative enzymes]

    • Gene

    Coordinates
    3,382,633 → 3,383,475

    The protein

    Protein family

  • short-chain dehydrogenases/reductases (SDR) family (according to Swiss-Prot)

    • Paralogous protein(s)

  • [protein|B7B1D28E50244704324920E5A6F110DA8D63F6C0|YxjF] (30,5%)

    • [SW|Cofactors]

  • FMN or FAD [Pubmed|21635694]

    • Structure

  • [PDB|3M1A] (from ''Streptomyces avemitilis'', 35% identity)

    • Expression and Regulation

    Operons

    genes
    [gene|D945CAD7209CB94A7B9E23263476124B7E8853DD|yusZ]-[gene|68EFECAC6B771D7BDCCD7FD30511152EDEFCEE5B|mrgA]
    description
    [Pubmed|22383849]
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    Biological materials

    Mutant

  • MGNA-B210 (yusZ::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1209 NBRP B. subtilis, Japan]
  • BKE32980 (Δ[gene|D945CAD7209CB94A7B9E23263476124B7E8853DD|yusZ]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE32980 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCCTAACCCTCCTATTAA, downstream forward: _UP4_TGATCTAAATTATAATTATT
  • BKK32980 (Δ[gene|D945CAD7209CB94A7B9E23263476124B7E8853DD|yusZ]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK32980 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCCTAACCCTCCTATTAA, downstream forward: _UP4_TGATCTAAATTATAATTATT