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yqhS [2019-08-07 11:14:22]
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yqhS [2019-08-07 11:14:22]

similar to 3-dehydroquinate dehydratase
locus
BSU_24470
pI
5.12
mw
16.29 kDa
protein length
148 aa Sequence Blast
gene length
447 bp Sequence Blast
function
unknown
product
unknown
essential
no
ec
4.2.1.10
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 6|Groups of genes] → [category|SW 6.6|Poorly characterized/ putative enzymes]

    • Gene

    Coordinates
    2,539,755 → 2,540,201

    The protein

    Catalyzed reaction/ biological activity

  • 3-dehydroquinate = 3-dehydroshikimate + H2O (according to Swiss-Prot)

    • Protein family

  • type-II 3-dehydroquinase family (single member, according to UniProt)

    • Structure

  • [PDB|1GQO]

    • Expression and Regulation

    Operons

    genes
    [gene|449EEBF33F52B461F244331ACD140E68CF64EE7C|yqhR]-[gene|D7503C73C0BC2E411C651E409E91C2E22E8842E5|yqhS]-[gene|33886A1EAC13B684E92BF94201C46617AD2844B3|papA]-[gene|3054CD45713BBD69C2A528DE24AF6AF37175FD9D|efp]
    description
    [pubmed|22383849]
    view in new tab

    genes
    [gene|D7503C73C0BC2E411C651E409E91C2E22E8842E5|yqhS]-[gene|33886A1EAC13B684E92BF94201C46617AD2844B3|papA]-[gene|3054CD45713BBD69C2A528DE24AF6AF37175FD9D|efp]
    description
    [pubmed|22383849]
    view in new tab

    Biological materials

    Mutant

  • MGNA-C465 (yqhS::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2463 NBRP B. subtilis, Japan]
  • CS214 (''[gene|D7503C73C0BC2E411C651E409E91C2E22E8842E5|yqhS]''::''aphA3'', available in [SW|Colin Harwood]'s and [SW|Jörg Stülke]'s labs) [Pubmed|27197833]
  • BKE24470 (Δ[gene|D7503C73C0BC2E411C651E409E91C2E22E8842E5|yqhS]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE24470 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACACAATCTCTCCTTTTCG, downstream forward: _UP4_AGCCAGCAAGGGGGAGAATC
  • BKK24470 (Δ[gene|D7503C73C0BC2E411C651E409E91C2E22E8842E5|yqhS]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK24470 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACACAATCTCTCCTTTTCG, downstream forward: _UP4_AGCCAGCAAGGGGGAGAATC

    • References

  • 27197833