SubtiBank SubtiBank
gerBB [2018-02-11T18:59:49.000Z]
You are currently viewing an outdated version of SubtiWiki. Please use the newest version!

gerBB [2018-02-11T18:59:49.000Z]

nutrient receptor, germination response to the combination of glucose, fructose, and KCl
locus
BSU35810
pI
9.89
mw
41.55 kDa
protein length
368 aa Sequence Blast
gene length
1104 bp Sequence Blast
function
germination
product
nutrient receptor
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 1|Cellular processes] → [category|SW 1.2|Transporters] → [category|SW 1.2.4|Transporters/ other] → [category|SW 1.2.4.1|Amino acid transporters] → [category|SW 1.2.4.1.4|APC superfamily]
  • [category|SW 4|Lifestyles] → [category|SW 4.2|Sporulation] → [category|SW 4.2.4|Germination] → [category|SW 4.2.4.1|Germinant receptors]
  • [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]

    • Gene

    Coordinates
    3,690,269 → 3,691,375

    The protein

    Paralogous protein(s)

  • [protein|5FF739B8C087207039BB6DC293EE77F59337ED0B|GerAB], [protein|D1AFCB1BE693AB6B8461B7764B6641E6EB1404FA|GerKB], [protein|B14179D0EF5D3493E5CDB8E15378A5088B4FFD10|YndE]

    • [SW|Localization]

  • spore inner membrane [Pubmed|21696470]

    • Expression and Regulation

    Operons

    genes
    [gene|3368743E6E03792DB83A38A19989123304DF7560|gerBA]-[gene|D70EC7C02BC79BED724489ABCB6356447F215B87|gerBB]-[gene|93D4D6864686E6E559E6CEFA69BAC77EEFAA1BE3|gerBC]
    description
    [Pubmed|8012571]

    sigma factors

  • [protein|5F24258282F3166B7696B9E9ABC1706E4D06C944|SigG]: sigma factor, [Pubmed|15699190,8012571], in [regulon|5F24258282F3166B7696B9E9ABC1706E4D06C944|SigG regulon]

    • regulation

  • expressed late during sporulation in the forespore ([protein|search|SigG]) [Pubmed|15699190,8012571]

    • additional information

  • 700 molecules are present per spore [PubMed|23749970]
    • view in new tab

    Biological materials

    Mutant

  • BKE35810 (Δ[gene|D70EC7C02BC79BED724489ABCB6356447F215B87|gerBB]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE35810 BGSC], [Pubmed|28189581], upstream reverse: _UP1_ATGCTCTGATTTCCTCATAG, downstream forward: _UP4_AAAATAGGGAGGGGGCAGCT
  • BKK35810 (Δ[gene|D70EC7C02BC79BED724489ABCB6356447F215B87|gerBB]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK35810 BGSC], [Pubmed|28189581], upstream reverse: _UP1_ATGCTCTGATTTCCTCATAG, downstream forward: _UP4_AAAATAGGGAGGGGGCAGCT

    • References

  • 10348844,12670969,15774895,7812448,8012571,16352818,21696470,23396907