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yydF [Mon Aug 31 2015 13:57:45 GMT+0200 (CEST)]
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yydF [Mon Aug 31 2015 13:57:45 GMT+0200 (CEST)]

secreted peptide, controls LiaR-LiaS activity
locus
BSU40180
pI
9.57
mw
5.00 kDa
function
control of LiaR-LiaS activity
product
secreted peptide
essential
no
synonyms

Genomic Context

      

categories

  • [category|SW 2|Metabolism] → [category|SW 2.6|Additional metabolic pathways] → [category|SW 2.6.6|Miscellaneous metabolic pathways] → [category|SW 2.6.6.1|Biosynthesis of antibacterial compounds]
  • [category|SW 3|Information processing] → [category|SW 3.4|Regulation of gene expression] → [category|SW 3.4.2|Transcription factors and their control] → [category|SW 3.4.2.2|Control of two-component response regulators] → [category|SW 3.4.2.2.3|Control of response regulators/ other]
  • [category|SW 4|Lifestyles] → [category|SW 4.3|Coping with stress] → [category|SW 4.3.15|Biosynthesis of antibacterial compounds]
  • [category|SW 6|Groups of genes] → [category|SW 6.12|Secreted proteins]
  • [SW|Categories] containing this gene/protein

  • [SW|transcription factors and their control]
  • This gene is a member of the following [SW|regulons]

  • [SW|AbrB regulon]
  • The protein

    Modification

  • modified by [protein|search|YydG] [Pubmed|23106164]
  • [SW|Localization]

  • extracellular (processing requires [protein|search|YydH], transport by [protein|search|YydI]-[protein|search|YydJ]) [Pubmed|23106164]
  • [SW|Interactions]

  • [protein|search|YydF]-[protein|search|YydG] [Pubmed|23106164]
  • [protein|search|YydF]-[protein|search|YydH] [Pubmed|23106164]
  • Expression and Regulation

    Operon

  • ''[protein|search|yydF]-[protein|search|yydG]-[protein|search|yydH]-[protein|search|yydI]-[protein|search|yydJ]'' [Pubmed|17921301]
  • [SW|Sigma factor]

  • [protein|search|SigA] [Pubmed|17921301]
  • Regulation

  • activated after transition to stationary phase([protein|search|AbrB]) [Pubmed|17921301]
  • Regulatory mechanism

  • [protein|search|AbrB]: transcription repression [Pubmed|17921301]
  • References

    Reviews

  • 23106164
  • Original publications

  • 12884008,17921301,17921301,21815947,23199363