ywjA [2019-06-12 10:39:36]

similar to ABC transporter (ATP-binding protein)

Locus: BSU37230

Isoelectric point: 6.14

Molecular weight: 64.39 kDa

Protein length: 575 aa

Gene length: 1728 bp

Function: unknown

Product: ABC transporter (ATP-binding protein)

Essential: no

Synonyms

Genomic Context

Loading

Categories containing this gene/protein

• Cellular processes → Transporters → ABC transporters → Exporters → Exporters of unknown function
• Groups of genes → Membrane proteins

Gene

Coordinates: 3,819,754 → 3,821,481

The protein

Protein family

• ABC transporter superfamily (according to UniProt)

Paralogous protein(s)

• YfiC, BmrA, YknU, YknV, YgaD, BmrC, YfiB

Domains

• has both a membrane-spanning and an ATP-binding domain PubMed

Structure

• 2HYD (from Staphylococcus aureus, 38% identity) PubMed

Expression and Regulation

Operons

• Genes: ywiE-ywjA-ywjB
  Description: PubMed

  Sigma factors

  • SigB: sigma factor, PubMed, in SigB regulon

  Regulatory mechanism

  • Fur: repression, PubMed, in Fur regulon

• Genes: ywjA-ywjB
  Description: PubMed

Biological materials

Mutant

• MGNA-B662 (ywjA::erm), available at the NBRP B. subtilis, Japan
• BKE37230 (ΔywjA::erm trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CACCCTATCTTCCCCCAATG, downstream forward: _UP4_ATGGTGCATCGATAGGAGGA
• BKK37230 (ΔywjA::kan trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CACCCTATCTTCCCCCAATG, downstream forward: _UP4_ATGGTGCATCGATAGGAGGA

References

Loading