SubtiBank SubtiBank
yokG [2019-07-03 11:23:10]
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yokG [2019-07-03 11:23:10]

similar to delta-endotoxin
locus
BSU21600
pI
4.20
mw
40.58 kDa
protein length
357 aa Sequence Blast
gene length
1074 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 4|Lifestyles] → [category|SW 4.3|Coping with stress] → [category|SW 4.3.18|Toxins, antitoxins and immunity against toxins/ based on similarity]
  • [category|SW 5|Prophages and mobile genetic elements] → [category|SW 5.1|Prophages] → [category|SW 5.1.2|SP-beta prophage]

    • Gene

    Coordinates
    2,278,602 → 2,279,675

    The protein

    Structure

  • [PDB|5GHE] (Cry6Aa from B. thuringiensis, 31% identity) [pubmed|27381865]

    • Biological materials

    Mutant

  • BKE21600 (Δ[gene|D2029DC18EDCF6342986A63A37AEADDA54C5755F|yokG]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE21600 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTCTTGACCCGCCCTTT, downstream forward: _UP4_TAAAAAATGGGTAATCTGAA
  • BKK21600 (Δ[gene|D2029DC18EDCF6342986A63A37AEADDA54C5755F|yokG]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK21600 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTCTTGACCCGCCCTTT, downstream forward: _UP4_TAAAAAATGGGTAATCTGAA

    • References

    Research papers

  • 27381865