SubtiBank SubtiBank
ycsN [2019-06-06 09:53:30]
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ycsN [2019-06-06 09:53:30]

similar to aryl-alcohol dehydrogenase
locus
BSU04150
pI
5.28
mw
33.99 kDa
protein length
300 aa Sequence Blast
gene length
903 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 6|Groups of genes] → [category|SW 6.6|Poorly characterized/ putative enzymes]

    • Gene

    Coordinates
    466,042 → 466,944

    The protein

    Protein family

  • aldo/keto reductase 2 family (according to Swiss-Prot)

    • Paralogous protein(s)

  • [protein|4DF9B105ABA64AFD5106EE75FCC9EFAB52BEFC83|YhdN]

    • Structure

  • [PDB|4R90] (from ''Salmonella Enterica'', 51% identity)

    • Expression and Regulation

    Operons

    genes
    [gene|5BBA2769A9C0EDB56625F008A55470C2E2885AA4|pbpC]-[gene|D0A2506FDCEA41D2A8910AC2837B46E0B311D63B|ycsN]
    description
    [Pubmed|22383849]
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    Biological materials

    Mutant

  • MGNA-C025 (ycsN::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2023 NBRP B. subtilis, Japan]
  • BKE04150 (Δ[gene|D0A2506FDCEA41D2A8910AC2837B46E0B311D63B|ycsN]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE04150 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGCAAAATCCCTCTTTTC, downstream forward: _UP4_TAAAAAGCATCAGTTTACCA
  • BKK04150 (Δ[gene|D0A2506FDCEA41D2A8910AC2837B46E0B311D63B|ycsN]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK04150 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGCAAAATCCCTCTTTTC, downstream forward: _UP4_TAAAAAGCATCAGTTTACCA