SubtiBank SubtiBank
yorK
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yorK

single-strand DNA-specific exonuclease
Locus
BSU_20350
Isoelectric point
6.56
Molecular weight
65.60 kDa
Protein length
576 aa Sequence Blast
Gene length
1731 bp Sequence Blast
Function
unknown
Product
single-strand DNA-specific exonuclease
Essential
no
Synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      
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Categories containing this gene/protein

  • Information processing → Genetics → DNA repair/ recombination/ based on similarity
  • Prophages and mobile genetic elements → Prophages → SP-beta prophage
  • Groups of genes → Phosphoproteins → Phosphorylation on a Tyr residue

    • Gene

    Coordinates
    2,179,526 → 2,181,256

    The protein

    Protein family

  • RecJ family (with RecJ, according to UniProt)

    • Paralogous protein(s)

  • RecJ

    • Domains

  • DHH-DHHA1 domain

    • Modification

  • phosphorylation on Tyr-473 PubMed

    • Structure

  • 5F54 (from Deinococcus radiodurans, the DHH-DHHA1 domain, 23% identity) PubMed

    • Biological materials

    Mutant

  • BKE20350 (ΔyorK::erm trpC2) available at BGSC, PubMed, upstream reverse: _UP1_GTCGCCAATTAGTCTATACT, downstream forward: _UP4_CTTGTGTTTTAAGGGGGAGA
  • BKK20350 (ΔyorK::kan trpC2) available at BGSC, PubMed, upstream reverse: _UP1_GTCGCCAATTAGTCTATACT, downstream forward: _UP4_CTTGTGTTTTAAGGGGGAGA

    • References

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