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ywbI [2017-8-11 16:0:3]
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ywbI [2017-8-11 16:0:3]

transcriptional regulator (LysR family), activator of the ywbH-ywbG operon
locus
BSU38310
pI
5.93
mw
34.52 kDa
protein length
301 aa Sequence Blast
gene length
903 bp Sequence Blast
function
control of expression of the ywbH-ywbG operon
product
transcriptional regulator (LysR family)
essential
no
synonyms
ipa-24d
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 3|Information processing] → [category|SW 3.4|Regulation of gene expression] → [category|SW 3.4.2|Transcription factors and their control] → [category|SW 3.4.2.6|Transcription factor/ other/ based on similarity]

    • Gene

    Coordinates
    3,932,198 → 3,933,103

    The protein

    Protein family

  • [SW|LysR family]

    • Effectors of protein activity

  • acetate activates [protein|CC55120C2AF455FA2AEAE39E21F57897B2B5BC39|YwbI] to bind DNA [Pubmed|26060272]

    • Expression and Regulation

    Operons

    genes
    [gene|CC55120C2AF455FA2AEAE39E21F57897B2B5BC39|ywbI]-[gene|9B82059498F72A67282DD54892EF02A305E3C674|thiM]-[gene|8FAEB6342E087BEDC16FDF5585B03B90ACFF8D11|thiE]
    description
    [Pubmed|9139923]

    sigma factors

  • [protein|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|SigA]: sigma factor, [Pubmed|9139923], in [regulon|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|SigA regulon]
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    Biological materials

    Mutant

  • MGNA-B675 (ywbI::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1674 NBRP B. subtilis, Japan]

    • References

  • 9139923,26060272