ydzE

unknown

locus: BSU_05140

pI: 6.92

mw: 8.40 kDa

protein length: 78 aa

gene length: 237 bp

function: unknown

product: unknown

essential: no

synonyms

Genomic Context

categories

• [category|SW 6|Groups of genes] → [category|SW 6.7|Proteins of unknown function]

Gene

Coordinates: 561,180 → 561,416

The protein

Protein family

• [SW|EamA transporter family] (according to UniProt)

[SW|Domains]

• [SW|EamA domain] (aa 2-70) (according to UniProt)

Expression and Regulation

Operons

• genes: [gene|24A86A4846187E6026A2B7645DC4B7C70908942E|ydeC]-[gene|CBEB1C62D727CF320E82C3ED636894B50F11E0AE|ydzE]
  description: [pubmed|22383849]

  sigma factors

  • [protein|580011DE5DC40EC9E7E0512791D328FAA010DCB8|SigB]: sigma factor, [Pubmed|11532142], in [regulon|580011DE5DC40EC9E7E0512791D328FAA010DCB8|SigB regulon]

Biological materials

Mutant

• MGNA-C165 (ydzE::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2163 NBRP B. subtilis, Japan]
• BKE05140 (Δ[gene|CBEB1C62D727CF320E82C3ED636894B50F11E0AE|ydzE]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE05140 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAAAAGGCCACCTAGAATTT, downstream forward: _UP4_TAACAAAAAAAAGCAAACTA
• BKK05140 (Δ[gene|CBEB1C62D727CF320E82C3ED636894B50F11E0AE|ydzE]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK05140 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAAAAGGCCACCTAGAATTT, downstream forward: _UP4_TAACAAAAAAAAGCAAACTA