SubtiBank SubtiBank
aimR
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aimR

viral quorum sensor, phage SPbeta lytic/lysogenic regulator
Locus
BSU_20860
Isoelectric point
5.86
Molecular weight
45.16 kDa
Protein length
386 aa Sequence Blast
Gene length
1161 bp Sequence Blast
Function
SPbeta lysis-lysogeny coordinator
Product
SPbeta arbitrium transcription factor
Essential
no
Synonyms
yopK
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      
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Categories containing this gene/protein

  • Prophages and mobile genetic elements → Prophages → SP-beta prophage

    • Gene

    Coordinates
    2,208,994 → 2,210,154

    The protein

    Structure

  • Apo-form: 5XYB (PubMed), 5ZW5 (PubMed), 6IPX (PubMed), 6HP3(PubMed), 6JG5 (PubMed)
  • Complexed with AimP hexapeptide (AimP): 5Y24 (PubMed), 5ZW6 (PubMed), 6IM4 (PubMed), 6HP5 (PubMed), 6JG9 (PubMed)
  • Complexed with DNA: 6HP7 (PubMed), 6JG8 (PubMed)

    • Biological materials

    Mutant

  • BKE20860 (ΔaimR::erm trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CATTATTTCCCCTCATTTCT, downstream forward: _UP4_TAAAGGAGGTGAGACAATGA
  • BKK20860 (ΔaimR::kan trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CATTATTTCCCCTCATTTCT, downstream forward: _UP4_TAAAGGAGGTGAGACAATGA

    • References

    Research papers

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