SubtiBank SubtiBank
ylyB [2018-02-10T13:46:14.000Z]
You are currently viewing an outdated version of SubtiWiki. Please use the newest version!

ylyB [2018-02-10T13:46:14.000Z]

similar to pseudouridylate synthase
Locus
BSU15460
Isoelectric point
5.43
Molecular weight
33.50 kDa
Protein length
303 aa Sequence Blast
Gene length
909 bp Sequence Blast
Function
RNA modification
Product
putative pseudouridylate synthase
Essential
no
E.C.
5.4.99.23
Synonyms
ylmL
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      
Loading

Categories containing this gene/protein

  • Information processing → Protein synthesis, modification and degradation → Translation → rRNA modification and maturation/ based on similarity

    • Gene

    Coordinates
    1,617,210 → 1,618,121

    The protein

    Catalyzed reaction/ biological activity

  • RNA uridine = RNA pseudouridine (according to Swiss-Prot)

    • Protein family

  • S4 RNA-binding domain (according to Swiss-Prot)

    • Paralogous protein(s)

  • YjbO, YhcT

    • Structure

  • 1V9F (RluD from E. coli, 42% identical) PubMed

    • Expression and Regulation

    Operons

    Genes
    lspA-ylyB-pyrR
    Description
    PubMed
    view in new tab

    Biological materials

    Mutant

  • BKE15460 (ΔylyB::erm trpC2) available at BGSC, PubMed, upstream reverse: _UP1_AGCGGTTATATCAATTTGAT, downstream forward: _UP4_TGACAGAGGGTTTCTTTTCT
  • BKK15460 (ΔylyB::kan trpC2) available at BGSC, PubMed, upstream reverse: _UP1_AGCGGTTATATCAATTTGAT, downstream forward: _UP4_TGACAGAGGGTTTCTTTTCT

    • References

    Loading