SubtiBank SubtiBank
ybcL [2019-06-07 08:25:00]
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ybcL [2019-06-07 08:25:00]

similar to chloramphenicol resistance protein
locus
BSU01890
pI
9.86
mw
41.25 kDa
protein length
390 aa Sequence Blast
gene length
1173 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 1|Cellular processes] → [category|SW 1.2|Transporters] → [category|SW 1.2.4|Transporters/ other] → [category|SW 1.2.4.12|Other transporters]
  • [category|SW 5|Prophages and mobile genetic elements] → [category|SW 5.1|Prophages] → [category|SW 5.1.4|Prophage 1]
  • [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]

    • Gene

    Coordinates
    211,859 → 213,031

    The protein

    Protein family

  • [SW|major facilitator superfamily] (according to UniProt)

    • [SW|Localization]

  • cell membrane (according to Swiss-Prot)

    • Expression and Regulation

    Operons

    genes
    [gene|C8070C5525BB0763161EDC2127757BAE6C937823|ybcL]
    description
    [http://dbtbs.hgc.jp/COG/prom/ybcL.html DBTBS]
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    Biological materials

    Mutant

  • MGNA-C510 (ybcL::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2508 NBRP B. subtilis, Japan]
  • BKE01890 (Δ[gene|C8070C5525BB0763161EDC2127757BAE6C937823|ybcL]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE01890 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATAAAACATTCACTCCTTA, downstream forward: _UP4_TAATTTCGAAAGTTCTAACA
  • BKK01890 (Δ[gene|C8070C5525BB0763161EDC2127757BAE6C937823|ybcL]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK01890 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATAAAACATTCACTCCTTA, downstream forward: _UP4_TAATTTCGAAAGTTCTAACA