SubtiBank SubtiBank
subA [Tue Dec 13 2016 11:16:29 GMT+0100 (CET)]
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subA [Tue Dec 13 2016 11:16:29 GMT+0100 (CET)]

locus
BSU00540
pI
5.19
mw
8.00 kDa
function
homologous recombination
product
unknown
essential
no
synonyms
yabK

Genomic Context

      

categories

  • [category|SW 3|Information processing] → [category|SW 3.1|Genetics] → [category|SW 3.1.5|DNA repair/ recombination]
  • [category|SW 3|Information processing] → [category|SW 3.1|Genetics] → [category|SW 3.1.5|DNA repair/ recombination] → [category|SW 3.1.5.6|Other proteins]
  • [category|SW 3|Information processing] → [category|SW 3.4|Regulation of gene expression] → [category|SW 3.4.1|Sigma factors and their control] → [category|SW 3.4.1.2|Control of sigma factors]
  • [category|SW 4|Lifestyles] → [category|SW 4.2|Sporulation] → [category|SW 4.2.1|Sporulation proteins] → [category|SW 4.2.1.4|Sporulation proteins/ other]
  • [SW|Categories] containing this gene/protein

  • [SW|DNA repair/ recombination], [SW|sigma factors and their control], [SW|sporulation proteins]
  • Gene

    Coordinates on the chromosome (coding sequence)
    60,130 -> 60,360

    Phenotypes of a mutant

  • sporulation defect (50-fold reduction of viable spore count) and arrest after engulfment [Pubmed|21037003]
  • The protein

    [SW|Localization]

  • localizes diffusely within the forespore compartment of sporangia at both early and late stages of sporulation, cytosolic protein [Pubmed|21037003]
  • [SW|Interactions]

  • [protein|search|SigF]-[protein|search|Fin] (probably) [Pubmed|21037003]
  • Expression and Regulation

    [SW|Sigma factor]

  • [protein|search|SigF] [Pubmed|21037003], [protein|search|SigG] [Pubmed|21037003]
  • Regulation

  • expressed in two waves in the forespore (after two hours ([protein|search|SigF]) and three hours ([protein|search|SigG]) after the onset of sporulation) [Pubmed|21037003]
  • References

  • 15317759,11810266