SubtiBank SubtiBank
ywoH
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ywoH

similar to transcriptional regulator ([SW|MarR family])
locus
BSU_36440
pI
8.10
mw
16.28 kDa
protein length
137 aa Sequence Blast
gene length
414 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 3|Information processing] → [category|SW 3.4|Regulation of gene expression] → [category|SW 3.4.2|Transcription factors and their control] → [category|SW 3.4.2.6|Transcription factor/ other/ based on similarity]

    • Gene

    Coordinates
    3,749,052 → 3,749,465

    The protein

    [SW|Domains]

  • [SW|HTH marR-type domain] (aa 5-136) (according to UniProt)

    • Structure

  • [PDB|3NRV] (from Acinetobacter sp., 27% identity)

    • Biological materials

    Mutant

  • MGNA-A217 (ywoH::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/217 NBRP B. subtilis, Japan]
  • BKE36440 (Δ[gene|C44717EB77EBB904451F838B69050D08040B30E2|ywoH]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE36440 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGTCGGTCTCCTTCTAAA, downstream forward: _UP4_TGAAAATAAGGAAGTGACAT
  • BKK36440 (Δ[gene|C44717EB77EBB904451F838B69050D08040B30E2|ywoH]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK36440 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGTCGGTCTCCTTCTAAA, downstream forward: _UP4_TGAAAATAAGGAAGTGACAT