ywcC

transcription repressor (TetR family), controls slrA expression

Locus: BSU_38220

Isoelectric point: 8.47

Molecular weight: 25.96 kDa

Protein length: 223 aa

Gene length: 672 bp

Function: control of slrA expression

Product: transcription repressor (TetR family)

Essential: no

Synonyms: ipa-33d

Genomic Context

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Categories containing this gene/protein

• Information processing → Regulation of gene expression → Transcription factors and their control → Transcription factors/ other
• Lifestyles → Exponential and early post-exponential lifestyles → Biofilm formation
• Lifestyles → Exponential and early post-exponential lifestyles → Biofilm formation → Other proteins required for biofilm formation

Gene

Coordinates: 3,922,292 → 3,922,963

The protein

Protein family

• TetR family

Domains

• HTH tetR-type domain (aa 11-71) (according to UniProt)

Expression and Regulation

Operons

• Genes: ywcC-gtcA-galK-galT
  Description: PubMed

  Regulation

  • repressed by glucose (CcpA) PubMed

Biological materials

Mutant

• MGNA-B230 (ywcC::erm), available at the NBRP B. subtilis, Japan
• BKE38220 (ΔywcC::erm trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CATATTTTTCTCCTGGCGGT, downstream forward: _UP4_CAGTGAAGTATAGAGAAATA
• BKK38220 (ΔywcC::kan trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CATATTTTTCTCCTGGCGGT, downstream forward: _UP4_CAGTGAAGTATAGAGAAATA

References

Reviews

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Original publications

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