rnaC [Tue Dec 29 2015 16:38:28 GMT+0100 (CET)]

small RNA, controls AbrB expression

locus: new_2773764_2773889

pI: 0.00

mw: 0.00 kDa

function: control of AbrB-mediated heterogeneity

product: small RNA, controls AbrB expression

essential: no

synonyms: S1022

Genomic Context

categories

• [category|SW 6|Groups of genes] → [category|SW 6.9|NcRNA] → [category|SW 6.9.5|Regulatory RNAs]

[SW|Categories] containing this gene/protein

• [SW|sRNA]

This gene is a member of the following [SW|regulons]

• [SW|SigD regulon]

Gene

Coordinates on the chromosome: 2,773,764 -> 2,773,889

Phenotypes of a mutant

• increased growth yield on minimal media [Pubmed|25790031]
• increased levels of [SW|AbrB] [Pubmed|25790031]

Protein

Catalyzed reaction/ biological activity

• forms a hybrid with the ''[SW|abrB]'' mRNA to trigger its degradation [Pubmed|25790031]

[SW|Interactions]

• [SW|RnaC]-mRNA of ''[SW|abrB]'' [Pubmed|25790031]

Expression and Regulation

Operon

• ''[SW|rnaC]'' [Pubmed|22383849]

Sigma factor

• [SW|SigD] [Pubmed|22383849]

References

• 25790031,22383849