ypzF [2019-03-01 19:10:49]

unknown

locus: BSU22019

pI: 10.37

mw: 5.40 kDa

protein length: 48 aa

gene length: 147 bp

function: unknown

product: unknown

essential: -

synonyms

Genomic Context

categories

• [category|SW 4|Lifestyles] → [category|SW 4.2|Sporulation] → [category|SW 4.2.1|Sporulation proteins] → [category|SW 4.2.1.4|Sporulation proteins/ other]
• [category|SW 6|Groups of genes] → [category|SW 6.7|Proteins of unknown function]

Gene

Coordinates: 2,311,986 → 2,312,132

Expression and Regulation

Operons

• genes: [gene|9899D0CC5FF530A48532A653075494686796564D|ypbS]-[gene|BD8D1EBA85928C4ECA4FF50556FC7C59F9BC0E9D|ypzF]
  description: [Pubmed|22383849]

• genes: [gene|22F930B371A833BAEA84B32FADBB2BBA0B91A53B|dynA]-[gene|9899D0CC5FF530A48532A653075494686796564D|ypbS]-[gene|BD8D1EBA85928C4ECA4FF50556FC7C59F9BC0E9D|ypzF]
  description: [Pubmed|22383849]

  sigma factors

  • [protein|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|SigA]: sigma factor, [Pubmed|8396117], in [regulon|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|SigA regulon]

• genes: [gene|BD8D1EBA85928C4ECA4FF50556FC7C59F9BC0E9D|ypzF]
  description: [Pubmed|22383849]

  sigma factors

  • [protein|5F24258282F3166B7696B9E9ABC1706E4D06C944|SigG]: sigma factor, [pubmed|30782632], in [regulon|5F24258282F3166B7696B9E9ABC1706E4D06C944|SigG regulon]

additional information

• the mRNA belongs to the 46 most abundant mRNA species in dormant spores [pubmed|30782632]

Biological materials

Mutant

• BKE22019 (Δ[gene|BD8D1EBA85928C4ECA4FF50556FC7C59F9BC0E9D|ypzF]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE22019 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGAATCCCCCCTTACGTC, downstream forward: _UP4_TGATAAATATTCAAACAGTA
• BKK22019 (Δ[gene|BD8D1EBA85928C4ECA4FF50556FC7C59F9BC0E9D|ypzF]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK22019 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGAATCCCCCCTTACGTC, downstream forward: _UP4_TGATAAATATTCAAACAGTA

References

Research papers

• 30782632