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pdaB [Tue Dec 13 2016 11:16:30 GMT+0100 (CET)]
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pdaB [Tue Dec 13 2016 11:16:30 GMT+0100 (CET)]

polysaccharide deacetylase
locus
BSU01570
pI
9.00
mw
28.00 kDa
function
spore cortex formation
product
polysaccharide deacetylase
essential
no
synonyms
ybaN
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 4|Lifestyles] → [category|SW 4.2|Sporulation] → [category|SW 4.2.1|Sporulation proteins] → [category|SW 4.2.1.4|Sporulation proteins/ other]

    • [SW|Categories] containing this gene/protein

  • [SW|sporulation proteins]

    • This gene is a member of the following [SW|regulons]

  • [SW|SigE regulon]

    • Gene

    Coordinates on the chromosome (coding sequence)
    159,779 -> 160,543

    Phenotypes of a mutant

  • ''[protein|search|pdaB] [protein|search|ytrI]'' and ''[protein|search|pdaB] [protein|search|ytrH]'' mutants are deficient in sporulation
  • inactivation of ''[SW|pdaB]'' reduces sporulation efficiency to 5% that of wild type cells [Pubmed|26735940]

    • The protein

    Protein family

  • polysaccharide deacetylase family (according to Swiss-Prot)

    • [SW|Localization]

  • forespore (according to Swiss-Prot)

    • Expression and Regulation

    Operon

  • '''pdaB''' [Pubmed|12662922]

    • [SW|Sigma factor]

  • [protein|search|SigE] [Pubmed|15699190,12662922]

    • Regulation

  • expressed during sporulation in the mother cell [Pubmed|12662922]

    • Regulatory mechanism

  • [SW|SpoIIID]: transcription repression [Pubmed|12662922]

    • Additional information

  • the mRNA is very stable (half-life > 15 min) [http://www.ncbi.nlm.nih.gov/sites/entrez/12884008 PubMed]

    • References

  • 12662922,12884008,15547282,15598884,26735940