SubtiBank SubtiBank
yhcI [2018-09-04 19:53:18]
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yhcI [2018-09-04 19:53:18]

similar to ABC transporter (membrane protein)
locus
BSU09090
pI
6.34
mw
34.73 kDa
protein length
313 aa Sequence Blast
gene length
939 bp Sequence Blast
function
unknown
product
ABC transporter (membrane protein)
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 1|Cellular processes] → [category|SW 1.2|Transporters] → [category|SW 1.2.1|ABC transporters] → [category|SW 1.2.1.2|Exporters] → [category|SW 1.2.1.2.6|Exporters of unknown function]
  • [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]

    • Gene

    Coordinates
    983,229 → 984,170

    The protein

    [SW|Localization]

  • cell membrane (according to Swiss-Prot)

    • Expression and Regulation

    Operons

    genes
    [gene|74B0D594308D313A54C7163759628655382B1F94|yhcE]-[gene|53E29A238EC817CE9B430BDED92DE8E9746C928B|yhcF]-[gene|E71E305A0DE5AB6BE24CE47DC1ECCD99670C24D8|yhcG]-[gene|70858AED096A80C1EAEB81F4B048368B665AB515|yhcH]-[gene|BAD93C5EAD25F1A257907F4C631C02FE97C7BC89|yhcI]
    description
    [pubmed|22383849]
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    Biological materials

    Mutant

  • MGNA-A654 (yhcI::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/654 NBRP B. subtilis, Japan]
  • BKE09090 (Δ[gene|BAD93C5EAD25F1A257907F4C631C02FE97C7BC89|yhcI]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE09090 BGSC], [Pubmed|28189581], upstream reverse: _UP1_AATTAAGCATGCTGAACCTC, downstream forward: _UP4_TAATAAAAAAAGCTGTTTTG
  • BKK09090 (Δ[gene|BAD93C5EAD25F1A257907F4C631C02FE97C7BC89|yhcI]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK09090 BGSC], [Pubmed|28189581], upstream reverse: _UP1_AATTAAGCATGCTGAACCTC, downstream forward: _UP4_TAATAAAAAAAGCTGTTTTG

    • References

  • 10092453,21815947