SubtiBank SubtiBank
ybfO [Tue Dec 13 2016 11:16:30 GMT+0100 (CET)]
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ybfO [Tue Dec 13 2016 11:16:30 GMT+0100 (CET)]

similar to erythromycin esterase
locus
BSU02310
pI
6.68
mw
51.00 kDa
function
unknown
product
unknown
essential
no
synonyms

Genomic Context

      

categories

  • [category|SW 4|Lifestyles] → [category|SW 4.3|Coping with stress] → [category|SW 4.3.14|Resistance against toxins/ antibiotics/ based on similarity]
  • [category|SW 4|Lifestyles] → [category|SW 4.3|Coping with stress] → [category|SW 4.3.2|Cell envelope stress proteins (controlled by SigM, V, W, X, Y)]
  • [category|SW 6|Groups of genes] → [category|SW 6.11|Efp-dependent proteins]
  • [category|SW 6|Groups of genes] → [category|SW 6.12|Secreted proteins]
  • [SW|Categories] containing this gene/protein

  • [SW|cell envelope stress proteins (controlled by SigM, V, W, X, Y)], [SW|resistance against toxins/ antibiotics]
  • This gene is a member of the following [SW|regulons]

  • [SW|AbrB regulon], [SW|SigW regulon], [SW|Efp-dependent proteins]
  • Gene

    Coordinates on the chromosome (coding sequence)
    249,979 -> 251,319

    The protein

    [SW|Localization]

  • extracellular (signal peptide) [Pubmed|18957862]
  • Expression and Regulation

    Operon

  • ''ybfO'' (according to [http://dbtbs.hgc.jp/COG/prom/ybfO.html DBTBS])
  • ''[protein|search|ybfO]-[protein|search|ybfP]'' [Pubmed|20817675]
  • ''[protein|search|ybfO]-[protein|search|ybfP]-[protein|search|ybfQ]'' [Pubmed|12207695]
  • [SW|Sigma factor]

  • [protein|search|SigW] [Pubmed|11866510]
  • Regulation

  • strongly induced by alkali shock ([protein|search|SigW] [Pubmed|11866510])
  • repressed during logarithmic growth ([protein|search|AbrB]) [Pubmed|18840696]
  • Regulatory mechanism

  • [protein|search|AbrB]: transcription repression [Pubmed|18840696,20817675]
  • Additional information

  • [protein|search|translation] is likely to require [protein|search|Efp] due to the presence of several consecutive proline residues [PubMed|23239624,23239623]
  • References

  • 18957862,11866510,18840696,12207695,20817675