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yvdD
putative lysine decarboxylase
Genomic Context
categories
[category|SW 6|Groups of genes] → [category|SW 6.6|Poorly characterized/ putative enzymes]Gene
Coordinates
3,558,940 → 3,559,515
The protein
Protein family
LOG family (single member, according to UniProt)Structure
[PDB|1T35]Additional information
Detected in spores. [Pubmed|12480901]Expression and Regulation
Operons
genes
[gene|B9DA06BF3617B86AD12A703A36D8BA2E0091AC8B|yvdD]
description
[Pubmed|22383849]
additional information
Putative NrdR-box located between [protein|search|YvdC] and [protein|search|YvdD], suggesting transcriptional regulation by NrdR ([protein|search|YtcG]). [Pubmed|15949864]view in new tabBiological materials
Mutant
MGNA-B629 (yvdD::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1628 NBRP B. subtilis, Japan]BKE34640 (Δ[gene|B9DA06BF3617B86AD12A703A36D8BA2E0091AC8B|yvdD]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE34640 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCTTGTCATCTCCGCATC, downstream forward: _UP4_TAAAAAAGAGATTTTCTGATBKK34640 (Δ[gene|B9DA06BF3617B86AD12A703A36D8BA2E0091AC8B|yvdD]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK34640 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCTTGTCATCTCCGCATC, downstream forward: _UP4_TAAAAAAGAGATTTTCTGATReferences
12480901,15949864,22383849