SubtiBank SubtiBank
rmgR [2019-06-06 11:43:37]
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rmgR [2019-06-06 11:43:37]

similar to transcription factor (AraC family)
locus
BSU30150
pI
6.34
mw
89.36 kDa
protein length
772 aa Sequence Blast
gene length
2319 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
ytdP
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 3|Information processing] → [category|SW 3.4|Regulation of gene expression] → [category|SW 3.4.2|Transcription factors and their control] → [category|SW 3.4.2.6|Transcription factor/ other/ based on similarity]
  • [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]

    • Gene

    Coordinates
    3,083,441 → 3,085,759

    The protein

    Protein family

  • [SW|AraC family]

    • [SW|Localization]

  • cell membrane (according to Swiss-Prot)

    • Expression and Regulation

    Operons

    genes
    [gene|B83FEAA1EB9F1B2BD9AA27D0B86DFC4A4B952A40|rmgR]
    description
    [Pubmed|22383849]
    view in new tab

    Biological materials

    Mutant

  • MGNA-A808 (ytdP::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/808 NBRP B. subtilis, Japan]
  • BKE30150 (Δ[gene|B83FEAA1EB9F1B2BD9AA27D0B86DFC4A4B952A40|rmgR]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE30150 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTCATAACATCCACTTC, downstream forward: _UP4_TAAAAAACCCAAAACCGCTT
  • BKK30150 (Δ[gene|B83FEAA1EB9F1B2BD9AA27D0B86DFC4A4B952A40|rmgR]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK30150 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTCATAACATCCACTTC, downstream forward: _UP4_TAAAAAACCCAAAACCGCTT

    • References

  • 21630458,23504016