rmgR

similar to transcription factor (AraC family)

locus: BSU_30150

pI: 6.34

mw: 89.36 kDa

protein length: 772 aa

gene length: 2319 bp

function: unknown

product: unknown

essential: no

synonyms: ytdP

Genomic Context

categories

• [category|SW 3|Information processing] → [category|SW 3.4|Regulation of gene expression] → [category|SW 3.4.2|Transcription factors and their control] → [category|SW 3.4.2.6|Transcription factor/ other/ based on similarity]
• [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]

Gene

Coordinates: 3,083,441 → 3,085,759

The protein

Protein family

• [SW|AraC family]

[SW|Domains]

• [SW|HTH araC/xylS-type domain] (aa 670-768) (according to UniProt)

[SW|Localization]

• cell membrane (according to UniProt)

Expression and Regulation

Operons

• genes: [gene|B83FEAA1EB9F1B2BD9AA27D0B86DFC4A4B952A40|rmgR]
  description: [Pubmed|22383849]

Biological materials

Mutant

• MGNA-A808 (ytdP::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/808 NBRP B. subtilis, Japan]
• BKE30150 (Δ[gene|B83FEAA1EB9F1B2BD9AA27D0B86DFC4A4B952A40|rmgR]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE30150 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTCATAACATCCACTTC, downstream forward: _UP4_TAAAAAACCCAAAACCGCTT
• BKK30150 (Δ[gene|B83FEAA1EB9F1B2BD9AA27D0B86DFC4A4B952A40|rmgR]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK30150 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTCATAACATCCACTTC, downstream forward: _UP4_TAAAAAACCCAAAACCGCTT

References

• 21630458,23504016