ykvT

similar to spore cortex-lytic enzyme, putative cell wall hydrolase

locus: BSU_13820

pI: 9.79

mw: 23.33 kDa

protein length: 208 aa

gene length: 627 bp

function: unknown

product: unknown

essential: no

synonyms

Genomic Context

categories

• [category|SW 1|Cellular processes] → [category|SW 1.1|Cell envelope and cell division] → [category|SW 1.1.3|Cell wall degradation/ turnover] → [category|SW 1.1.3.2|Autolysis/ based on similarity]

Gene

Coordinates: 1,448,506 → 1,449,132

The protein

Structure

• [PDB|4FET] (from B. anthracis, corresponds to aa 70 ... 207, 35% identity) [pubmed|22777830]

Expression and Regulation

Operons

• genes: [gene|9949D9A6E04389D08AE8F874DA5019994C06AF88|ykzS]-[gene|B81F1F1ED944D9F2A72BD736E145AD12BB54A7C3|ykvT]
  description: [Pubmed|22383849]

  regulatory mechanism

  • [protein|7F340423A34CE40D1F1AA8D373F7C4B859A6496D|WalR]: activation, [Pubmed|12950927], in [regulon|7F340423A34CE40D1F1AA8D373F7C4B859A6496D|WalR regulon]

Biological materials

Mutant

• MGNA-A054 (ykvT::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/54 NBRP B. subtilis, Japan]
• BKE13820 (Δ[gene|B81F1F1ED944D9F2A72BD736E145AD12BB54A7C3|ykvT]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE13820 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATACAGTTTCCTCCTTAAA, downstream forward: _UP4_TAAGCATAGAAGAGACAATT
• BKK13820 (Δ[gene|B81F1F1ED944D9F2A72BD736E145AD12BB54A7C3|ykvT]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK13820 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATACAGTTTCCTCCTTAAA, downstream forward: _UP4_TAAGCATAGAAGAGACAATT

References

• 12950927,23199363,22777830