SubtiBank SubtiBank
ykhA
You are currently viewing an outdated version of SubtiWiki. Please use the newest version!

ykhA

similar to acyl-CoA thioesterase
locus
BSU_13030
pI
7.79
mw
19.15 kDa
protein length
172 aa Sequence Blast
gene length
519 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 6|Groups of genes] → [category|SW 6.6|Poorly characterized/ putative enzymes]

    • Gene

    Coordinates
    1,372,035 → 1,372,553

    The protein

    Protein family

  • acyl coenzyme A hydrolase family (single member, according to UniProt)

    • [SW|Domains]

  • HotDog ACOT-type domain (aa 10-122) (according to UniProt)

    • Structure

  • [PDB|1Y7U] (from ''Bacillus Cereus'', 59% identity)
  • [PDB|3SPS] (from ''Bacillus halodurans'', 49% identity, 80% similarity)

    • Expression and Regulation

    Operons

    genes
    [gene|B6EAAEFF8BBE8F8381F3999C6D1E5EFEBC90B0BA|ykhA]
    description
    [Pubmed|22383849]
    view in new tab

    Biological materials

    Mutant

  • MGNA-A744 (ykhA::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/744 NBRP B. subtilis, Japan]
  • BKE13030 (Δ[gene|B6EAAEFF8BBE8F8381F3999C6D1E5EFEBC90B0BA|ykhA]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE13030 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATACCTTTCTCCCCTTTGA, downstream forward: _UP4_TGAACGTTAAACCCAAAACA
  • BKK13030 (Δ[gene|B6EAAEFF8BBE8F8381F3999C6D1E5EFEBC90B0BA|ykhA]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK13030 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATACCTTTCTCCCCTTTGA, downstream forward: _UP4_TGAACGTTAAACCCAAAACA

    • References

    Research papers

  • 28516784