SubtiBank SubtiBank
yokD [2019-01-30 14:27:49]
You are currently viewing an outdated version of SubtiWiki. Please use the newest version!

yokD [2019-01-30 14:27:49]

similar to aminoglycoside N3-acetyltransferase
locus
BSU21630
pI
6.70
mw
30.76 kDa
protein length
272 aa Sequence Blast
gene length
819 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 4|Lifestyles] → [category|SW 4.3|Coping with stress] → [category|SW 4.3.14|Resistance against toxins/ antibiotics/ based on similarity]
  • [category|SW 5|Prophages and mobile genetic elements] → [category|SW 5.1|Prophages] → [category|SW 5.1.2|SP-beta prophage]

    • Gene

    Coordinates
    2,281,667 → 2,282,485

    The protein

    Structure

  • [PDB|2NYG], [PDB|3IJW] (complex with CoA, from ''B. anthracis'')

    • Expression and Regulation

    Operons

    genes
    [gene|B5DC3ECD047CCB48D3A40E23A4326BBAF088C1AA|yokD]

    description

  • [pubmed|22383849]
    • view in new tab

    Biological materials

    Mutant

  • BKE21630 (Δ[gene|B5DC3ECD047CCB48D3A40E23A4326BBAF088C1AA|yokD]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE21630 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTAGTTCATCTCCTATC, downstream forward: _UP4_TAGCTTGGTCTACCAAATGA
  • BKK21630 (Δ[gene|B5DC3ECD047CCB48D3A40E23A4326BBAF088C1AA|yokD]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK21630 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTAGTTCATCTCCTATC, downstream forward: _UP4_TAGCTTGGTCTACCAAATGA

    • References

  • 21601576