ytvI [2019-06-25 09:29:52]

sporulation protein

locus: BSU29160

pI: 9.37

mw: 40.45 kDa

protein length: 371 aa

gene length: 1116 bp

function: unknown

product: sporulation protein

essential: no

synonyms

Genomic Context

categories

• [category|SW 4|Lifestyles] → [category|SW 4.2|Sporulation] → [category|SW 4.2.1|Sporulation proteins] → [category|SW 4.2.1.4|Sporulation proteins/ other]
• [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]

Gene

Coordinates: 2,983,164 → 2,984,279

Phenotypes of a mutant

• inactivation of ''[gene|B405C91C2724D7DC8DC3970F5D545915C460EFEF|ytvI]'' reduces sporulation efficiency to 14% that of wild type cells [Pubmed|26735940]

The protein

Protein family

• UPF0118 (perM) family (according to Swiss-Prot)

[SW|Localization]

• cell membrane (according to UniProt)

Expression and Regulation

Operons

• genes: [gene|B405C91C2724D7DC8DC3970F5D545915C460EFEF|ytvI]
  description: [Pubmed|12662922]

  sigma factors

  • [protein|3CB24D493B3282278B7DC61CE3C793DFA815F9E2|SigE]: sigma factor, [Pubmed|12662922], in [regulon|3CB24D493B3282278B7DC61CE3C793DFA815F9E2|SigE regulon]

  regulation

  • expressed early during sporulation in the mother cell ([protein|search|SigE]) [Pubmed|12662922]

Biological materials

Mutant

• MGNA-A178 (ytvI::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/178 NBRP B. subtilis, Japan]
• BKE29160 (Δ[gene|B405C91C2724D7DC8DC3970F5D545915C460EFEF|ytvI]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE29160 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACAAAAACGGTCCTCCTCT, downstream forward: _UP4_TAAAACGGCAGCCGTTTTTT
• BKK29160 (Δ[gene|B405C91C2724D7DC8DC3970F5D545915C460EFEF|ytvI]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK29160 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACAAAAACGGTCCTCCTCT, downstream forward: _UP4_TAAAACGGCAGCCGTTTTTT

References

• 12662922,26735940