SubtiBank SubtiBank
ydfS [2018-06-21 17:37:09]
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ydfS [2018-06-21 17:37:09]

unknown
locus
BSU05540
pI
8.45
mw
26.96 kDa
protein length
235 aa Sequence Blast
gene length
705 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 4|Lifestyles] → [category|SW 4.2|Sporulation] → [category|SW 4.2.1|Sporulation proteins] → [category|SW 4.2.1.4|Sporulation proteins/ other]
  • [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]

    • Gene

    Coordinates
    601,019 → 601,726

    Expression and Regulation

    Operons

    genes
    [gene|B37938C639FC87DAA72AA82998DA8DF25E63CF37|ydfS]
    description
    [Pubmed|16497325]

    sigma factors

  • [protein|5F24258282F3166B7696B9E9ABC1706E4D06C944|SigG]: sigma factor, [Pubmed|16497325], in [regulon|5F24258282F3166B7696B9E9ABC1706E4D06C944|SigG regulon]

    • regulation

  • expressed during sporulation in the forespore ([protein|search|SigG]) [Pubmed|16497325]
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    Biological materials

    Mutant

  • MGNA-C156 (ydfS::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2154 NBRP B. subtilis, Japan]
  • BKE05540 (Δ[gene|B37938C639FC87DAA72AA82998DA8DF25E63CF37|ydfS]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE05540 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGTTATGGCGCTCCCCGC, downstream forward: _UP4_AAGGAATGAAGGAACAATCA
  • BKK05540 (Δ[gene|B37938C639FC87DAA72AA82998DA8DF25E63CF37|ydfS]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK05540 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGTTATGGCGCTCCCCGC, downstream forward: _UP4_AAGGAATGAAGGAACAATCA

    • References

  • 16497325