SubtiBank SubtiBank
yhdT [Tue Dec 13 2016 11:16:31 GMT+0100 (CET)]
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yhdT [Tue Dec 13 2016 11:16:31 GMT+0100 (CET)]

unknown
locus
BSU09590
pI
4.00
mw
51.00 kDa
function
unknown
product
unknown
essential
no
synonyms

Genomic Context

      

categories

  • [category|SW 1|Cellular processes] → [category|SW 1.3|Homeostasis] → [category|SW 1.3.1|Metal ion homeostasis (K, Na, Ca, Mg)] → [category|SW 1.3.1.1|Magnesium uptake/ efflux]
  • [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]
  • [SW|Categories] containing this gene/protein

  • [SW|proteins of unknown function], [SW|membrane proteins]
  • Gene

    Coordinates on the chromosome (coding sequence)
    1,035,554 -> 1,036,939

    The protein

    Protein family

  • UPF0053 family (according to Swiss-Prot)
  • Paralogous protein(s)

  • [SW|YhdP], [SW|YrkA], [SW|YqhB], [SW|YugS]
  • [SW|Domains]

  • [SW|DUF21 domain] (7-202)
  • 2 [SW|CBS domain]s (221-280, 290-347)
  • [SW|Localization]

  • cell membrane (according to Swiss-Prot)
  • Expression and Regulation

    Additional information

  • term-seq has identified a potential novel regulatory RNA element including an intrinsic transcription terminator upstream of ''yhdT'' [Pubmed|27120414]
  • Biological materials

    Mutant

  • MGNA-A698 (yhdT::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/698 NBRP B. subtilis, Japan]
  • Expression vector

  • pGP2928 (N-terminal His-tag, purification from ''E. coli'', in [SW|pWH844]), available in [SW|Jörg Stülke]'s lab
  • References

  • 20525796,27120414