SubtiBank SubtiBank
ybfM [2018-02-09T23:24:50.000Z]
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ybfM [2018-02-09T23:24:50.000Z]

similar to alkaline phosphatase
Locus
BSU02280
Isoelectric point
9.48
Molecular weight
18.20 kDa
Protein length
162 aa Sequence Blast
Gene length
486 bp Sequence Blast
Function
unknown
Product
unknown
Essential
no
Synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      
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Categories containing this gene/protein

  • Lifestyles → Coping with stress → Cell envelope stress proteins (controlled by SigM, V, W, X, Y)
  • Groups of genes → Membrane proteins
  • Groups of genes → Poorly characterized/ putative enzymes

    • Gene

    Coordinates
    248,268 → 248,756

    The protein

    Protein family

  • dedA family (according to Swiss-Prot)

    • Paralogous protein(s)

  • YngC (29%), YkoX (30%)

    • Localization

  • cell membrane (according to Swiss-Prot)

    • Expression and Regulation

    Operons

    Genes
    ybfK-pssA-ybfM-psd
    Description
    PubMed

    Sigma factors

  • SigA: sigma factor, PubMed, in SigA regulon
  • SigX: sigma factor, PubMed, in SigX regulon
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    Biological materials

    Mutant

  • BKE02280 (ΔybfM::erm trpC2) available at BGSC, PubMed, upstream reverse: _UP1_GTAATCCGCTATGAGCTGCT, downstream forward: _UP4_ATCGGAAGGGTTATAGGGAT
  • BKK02280 (ΔybfM::kan trpC2) available at BGSC, PubMed, upstream reverse: _UP1_GTAATCCGCTATGAGCTGCT, downstream forward: _UP4_ATCGGAAGGGTTATAGGGAT

    • References

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