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glpF [Fri Aug 12 2016 13:43:24 GMT+0200 (CEST)]
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glpF [Fri Aug 12 2016 13:43:24 GMT+0200 (CEST)]

glycerol facilitator
locus
BSU09280
pI
9.00
mw
28.00 kDa
function
glycerol uptake
product
glycerol facilitator
essential
no
synonyms

Genomic Context

      

categories

  • [category|SW 1|Cellular processes] → [category|SW 1.2|Transporters] → [category|SW 1.2.4|Transporters/ other] → [category|SW 1.2.4.3|Carbohydrate transporter]
  • [category|SW 2|Metabolism] → [category|SW 2.2|Carbon metabolism] → [category|SW 2.2.2|Utilization of specific carbon sources] → [category|SW 2.2.2.3|Utilization of glycerol/ glycerol-3-phosphate]
  • [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]
  • [SW|Categories] containing this gene/protein

  • [SW|transporters/ other], [SW|utilization of specific carbon sources], [SW|membrane proteins]
  • This gene is a member of the following [SW|regulons]

  • [SW|AbrB regulon], [SW|CcpA regulon], [SW|GlpP regulon]
  • Gene

    Coordinates on the chromosome (coding sequence)
    1,002,501 -> 1,003,325

    The protein

    Protein family

  • View classification (according to Swiss-Prot)
  • Structure

  • [PDB|1FX8] (the protein from ''E. coli'', 37% identity)
  • [SW|Localization]

  • cell membrane (according to Swiss-Prot)
  • Expression and Regulation

    Operon

  • ''[protein|search|glpF]-[protein|search|glpK]'' [Pubmed|2127799]
  • [SW|Sigma factor]

  • [protein|search|SigA] [Pubmed|2127799]
  • Regulation

  • repressed by glucose (8-fold) ([protein|search|CcpA]) [Pubmed|12850135]
  • induction by glycerol ([protein|search|GlpP]) [Pubmed|8436953]
  • strongly induced in response to glucose starvation in M9 medium [Pubmed|23033921]
  • Regulatory mechanism

  • [protein|search|CcpA]: transcription repression [Pubmed|12850135]
  • [protein|search|GlpP]-dependent [SW|RNA switch] (transcriptional antitermination) [Pubmed|8436953]
  • [protein|search|AbrB]: transcription activation [Pubmed|20817675]
  • Biological materials

    Mutant

  • GP99 (cat) (available in [SW|Jörg Stülke]'s lab)
  • References

  • 12850135,8436953,11929549,23033921,22900538,20817675