SubtiBank SubtiBank
yugI
You are currently viewing an outdated version of SubtiWiki. Please use the newest version!

yugI

similar to the C-terminal domain of E. coli polyribonucleotide phosphorylase and to four repeated domains at the N-terminus of E. coli ribosomal protein S1, has an RNA-binding surface
Locus
BSU_31390
Isoelectric point
5.92
Molecular weight
14.14 kDa
Protein length
130 aa Sequence Blast
Gene length
393 bp Sequence Blast
Function
unknown
Product
unknown
Essential
no
Synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      
Loading

Categories containing this gene/protein

  • Groups of genes → Proteins of unknown function

    • Gene

    Coordinates
    3,225,178 → 3,225,570

    The protein

    Paralogous protein(s)

  • YabR: 51% identity

    • Domains

  • S1 domain (aa 8-77) (according to UniProt)

    • Structure

  • 2K4K PubMed

    • Localization

  • cytoplasm (according to Swiss-Prot)

    • Additional information

  • subject to Clp-dependent proteolysis upon glucose starvation PubMed
  • belongs to the 100 most abundant proteins PubMed

    • Expression and Regulation

    Operons

    Genes
    yugI
    Description
    PubMed

    Regulatory mechanism

  • stringent response: negative regulation, in stringent response

    • Regulation

  • RelA dependent downregulation (Class I) during stringent response PubMed

    • Additional information

  • A ncRNA is predicted between 'yugI' and 'alaT' PubMed
    • view in new tab

    Biological materials

    Mutant

  • MGNA-A620 (yugI::erm), available at the NBRP B. subtilis, Japan
  • BKE31390 (ΔyugI::erm trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CATTCATAACAACTCCTAAG, downstream forward: _UP4_TAAGCATGAAAAAAGCACCG
  • BKK31390 (ΔyugI::kan trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CATTCATAACAACTCCTAAG, downstream forward: _UP4_TAAGCATGAAAAAAGCACCG

    • References

    Loading