SubtiBank SubtiBank
yolD [2019-05-21 19:01:35]
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yolD [2019-05-21 19:01:35]

unknown
locus
BSU21510
pI
4.75
mw
12.86 kDa
protein length
110 aa Sequence Blast
gene length
334 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProt

Genomic Context

      

categories

  • [category|SW 3|Information processing] → [category|SW 3.1|Genetics] → [category|SW 3.1.5|DNA repair/ recombination] → [category|SW 3.1.5.6|Other proteins]
  • [category|SW 5|Prophages and mobile genetic elements] → [category|SW 5.1|Prophages] → [category|SW 5.1.2|SP-beta prophage]

    • The protein

    Paralogous protein(s)

  • [protein|94F2146AC6998CC77CD2E86CE8BE8DC98AEBB9CD|YozL], [protein|9BC3DF46C944A0FD5CAAB4513C4AF00EFC5FC8D5|YqjX]

    • [SW|Localization]

  • cell membrane (according to Swiss-Prot)

    • Expression and Regulation

    Operons

    genes
    [gene|A9D5625FF5F1A3845FF6F8A290F647CCA73D39EF|yolD]-[gene|BE8D5E038C0FD748C0F9C3F18DCA601BFFE8EA52|uvrX]
    description
    [Pubmed|16267290]

    regulatory mechanism

  • [protein|D267AF38B0CF107042326E9B8F3DD3C9C85840E4|LexA]: repression, [Pubmed|16267290], in [regulon|D267AF38B0CF107042326E9B8F3DD3C9C85840E4|LexA regulon]

    • regulation

  • induced by DNA damage ([protein|search|LexA]) [Pubmed|16267290]
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    Biological materials

    Mutant

  • BKE21510 ([gene|A9D5625FF5F1A3845FF6F8A290F647CCA73D39EF|yolD]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE21510 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATATCGCCCCACTCCTTTA, downstream forward: _UP4_AATAACATCATAGGAGTTAC
  • BKK21510 ([gene|A9D5625FF5F1A3845FF6F8A290F647CCA73D39EF|yolD]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK21510 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATATCGCCCCACTCCTTTA, downstream forward: _UP4_AATAACATCATAGGAGTTAC

    • References

  • 16267290,30916324