SubtiBank SubtiBank
yloC [2019-07-01 10:29:25]
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yloC [2019-07-01 10:29:25]

unknown
locus
BSU15660
pI
4.87
mw
33.48 kDa
protein length
291 aa Sequence Blast
gene length
876 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 6|Groups of genes] → [category|SW 6.7|Proteins of unknown function]

    • Gene

    Coordinates
    1,640,720 1,641,595

    The protein

    Protein family

  • UPF0701 family (according to Swiss-Prot)

    • Expression and Regulation

    Operons

    genes
    [gene|A57D2C1536F3E93CD687C28C59FF297355CAB303|yloC]-[gene|6AF1CB8998BE9C71DF4F1201A7F74FF7E75CB799|remA]-[gene|1BC994DE60A7BB35DEDD7154581A396D29AA94A7|gmk]-[gene|921933B6B893083F151AABDEDCBC65F2E55677BE|yloH]

    description

  • [pubmed|22383849]

    • sigma factors

  • [protein|CFF318EE6CACDEE763FBF96A2ABB46E944679AAA|SigF]: sigma factor, [Pubmed|23396918], in [regulon|CFF318EE6CACDEE763FBF96A2ABB46E944679AAA|SigF regulon]

    • regulation

  • expressed during vegetative growth and early during sporulation in the forespore ([protein|CFF318EE6CACDEE763FBF96A2ABB46E944679AAA|SigF]) [Pubmed|23396918]
    • view in new tab

    genes
    [gene|A57D2C1536F3E93CD687C28C59FF297355CAB303|yloC]-[gene|6AF1CB8998BE9C71DF4F1201A7F74FF7E75CB799|remA]-[gene|1BC994DE60A7BB35DEDD7154581A396D29AA94A7|gmk]-[gene|921933B6B893083F151AABDEDCBC65F2E55677BE|yloH]-[gene|2B67C63442F28F6BCBA3BA6DE4B563C73E8DF16C|yloI]-[gene|AF5ADDA2A98EC18BB72A81AA0336E639C0D1F430|priA]-[gene|3D41FB608DB70B9482312A1BBCCDBDA7FB713AFA|defA]-[gene|06971E9AAB033E2878914A76645F99E97CE8A90A|fmt]-[gene|1370D8783450D538C71E3DE8EA5B37DFEE073FF0|yloM]-[gene|5DEBD84E5937DB8B7F29C729FAA0076DF86A5451|yloN]

    description

  • [pubmed|22383849]
    • view in new tab

    genes
    [gene|7821A09DADC6EAF589A882F05CC34BE900E06F2A|yloB]-[gene|A57D2C1536F3E93CD687C28C59FF297355CAB303|yloC]-[gene|6AF1CB8998BE9C71DF4F1201A7F74FF7E75CB799|remA]-[gene|1BC994DE60A7BB35DEDD7154581A396D29AA94A7|gmk]-[gene|921933B6B893083F151AABDEDCBC65F2E55677BE|yloH]

    description

  • [pubmed|22383849]

    • regulation

  • expressed during sporulation in the mother cell [pubmed|12161109]
    • view in new tab

    Biological materials

    Mutant

  • GP2609 ([gene|A57D2C1536F3E93CD687C28C59FF297355CAB303|yloC]::''cat''), available in [SW|Jörg Stülke]'s lab
  • MGNA-B131 (yloC::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1130 NBRP B. subtilis, Japan]
  • BKE15660 ([gene|A57D2C1536F3E93CD687C28C59FF297355CAB303|yloC]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE15660 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTTAAAACACCCAATTC, downstream forward: _UP4_TAGTGACTGTGCGTATTGTT
  • BKK15660 ([gene|A57D2C1536F3E93CD687C28C59FF297355CAB303|yloC]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK15660 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTTAAAACACCCAATTC, downstream forward: _UP4_TAGTGACTGTGCGTATTGTT